Ganhador do prêmio Nobel de Química 2012

Achei bastante inspirador e por isso resolvi compartilhar!

Video com o ganhador

Asked for advice for young scientists by a reporter at the news conference, Kobilka said: “This is a fantastic way to spend your life. It’s hard, but if you’re interested and persevere, you can be successful. Every day is a challenge and exciting.” He cited his “irrational optimism” when asked why he continued his work in the face of seemingly insurmountable difficulty. “When something didn’t work, you’d be a little down, then at end of the day at home, you’ll think, ‘Oh, maybe this will work’. You always think something is going to work.”

Espero que gostem!

 

Report 11/03/13

Analysis Ramires Ingenuity

 

 

How to convert epub to pdf on Ubuntu 12.04

sudo apt-get install okular okular-extra-backends
Them open the file with ikular and export as pdf

 

Report 08/03/13

Try TINYMCE_SETUP_JS = ‘/static/js/tinymce_setup.js’. Replace static with STATIC_URL.

 

 

Installing Paperpile 0.5.1, Mendeley 1.8 and ReadCube in Ubuntu 12.04

Read Cube

./winetricks wininet adobeair mfc42 mono210 msxml6 quicktime76 vcrun6

Failed installing msxml6!

Had to install using arch32

remove .wine folder and type

WINEARCH=win32 winecfg

I used winxp as profile!

——————-
fixme:ras:RasEnumConnectionsW RAS support is not implemented! Configure program to use LAN connection/winsock instead!
——————-

follow this instruction.

1. Run winecfg

2. Click on Librarys

3. Choose “rasapi32” in “new overrides for” and click on add.

4. Click on rasapi32 and hit “edit”

5. Choose “disabled”

Taking forever to load!

Mendeley Desktop version 1.8

This is the most stablished

Paperpile

The thing I liked from the beginning in this software is that they have a version for linux and Mac. Strange they couldn’t make a version for windows :P. I discovered they used Catalyst  a perl MVC framework and this really impressed me.

They thing I didn’t like was that they don’t watch folders for new papers, and they duplicate your paper in a folder caled ~/.paperpile

I had some problems import 90 articles and I believe I’m supposed to add it by “manually” … boring!

Another killing feature is the possibility to search and download papers directly, but unfortunately they don’t have a good support for proxy, this would be really necessary since I’m downloading articles from everywhere I am not only from work.

The pdf preview sucks a little bit but they are still developing it. better would be if I could open the pdf outside the program.

They could create and account and sync my data.

Another problem I had was with screen resolution 1024×600, I usually use a big screen resolution since my computer is a pavillion dm1. had to change to 1280×768.

I accidentaly closed the app during the long time for importing, Had to import all folder again, takes forever!

I’m receiving this message on terminal:

QNetworkAccessFileBackendFactory: URL has no schema set, use file:// for files

It accused duplicated files while there it was supplementary material form the same paper!

Everytime I add a new paper I need to add the folder and wait for the import of all my 423 papers again ? Seriously ? 9minutes ? No way

Google Scholar not working

Very cool they have Cloud for Authors, Journals and Labels

You Can’t add one label inside the other, like folders on Mendeley!

Case Study: Adding a citation in your document while writing!

Mendeley

Found: http://www.ncbi.nlm.nih.gov/pubmed/2231712

http://bio.cs.washington.edu/blast.pdf

 

Conclusions

Mendeley is the most mature and has the best features such as watching folders and sync with Web so you can read in your tablet

Now Configuring Options on Mendeley

 

 

Get 10% of triobra1 and calculate REAP /projects/relatedness/plink-1.07-x86_64/plink –file trio1_bra.phasing –thin 0.2 –noweb –geno 0 –recode –out trio1_bra.phasing.20   /projects/relatedness/plink-1.07-x86_64/plink –file trio1_bra.phasing –thin 0.1 –noweb –geno 0 –recode –out trio1_bra.phasing.10 Of these, 956761  snps are new, 5637 already exist Cálculo só com os brasileiros merge3.ped

 

Get 10% of triobra1 and calculate REAP /projects/relatedness/plink-1.07-x86_64/plink –file trio1_bra.phasing –thin 0.2 –noweb –geno 0 –recode –out trio1_bra.phasing.20   /projects/relatedness/plink-1.07-x86_64/plink –file trio1_bra.phasing –thin 0.1 –noweb –geno 0 –recode –out trio1_bra.phasing.10 Of these, 956761  snps are new, 5637 already exist Cálculo só com os brasileiros merge3.ped

 

Report 210213

Vcf::throw(‘Vcf4_1=HASH(0x1ce37c8)’, ‘The command “tabix -l /projects/1000genomes/integrated_call_s…’) called at /lgc/programs/vcftools_0.1.10/lib/perl5/site_perl/Vcf.pm line 2630
VcfReader::get_chromosomes(‘Vcf4_1=HASH(0x1ce37c8)’) called at /lgc/programs/vcftools_0.1.10/bin/vcf-merge line 195
main::init_cols(‘HASH(0x18d5c18)’, ‘Vcf4_1=HASH(0x18dcd30)’) called at /lgc/programs/vcftools_0.1.10/bin/vcf-merge line 277
main::merge_vcf_files(‘HASH(0x18d5c18)’) called at /lgc/programs/vcftools_0.1.10/bin/vcf-merge line 12
Traceback (most recent call last):
File “/lgc/scripts/reap.py”, line 51, in

 

Report 20/11/12

1000genomes data

unlimited storage

http://www.thewebhostingdir.com/shared-hosting/unlimited-data-transfer-hosting/

 

Where I can store 1000 files of 1.2GB or or 1 file of 7TB ?

 

Report 10/10/12

http://watson.nci.nih.gov/bioc_mirror/packages/release/bioc/vignettes/GenomicFeatures/inst/doc/GenomicFeatures.pdf

http://www.bioconductor.org/packages/2.11/bioc/manuals/GenomicFeatures/man/GenomicFeatures.pdf

http://bioconductor.org/help/course-materials/2010/SeattleIntro/GenomicFeatures.pdf

Page 6 exactly what we need.

http://www.bioconductor.org/help/course-materials/2012/BioC2012/ranges.R

http://bioconductor.org/packages/release/bioc/vignettes/GenomicFeatures/inst/doc/GenomicFeatures.pdf