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Release of IPython 6.0

It is with great pleasure that today we released IPython 6.0 — almost a year after the 5.0 version. Users on Python 3.3 and above can get this latest version with all its new features by asking your package manager to upgrade IPython. If you are using pip: Source: Release Read more…

By raony, ago
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New Pynnotator released!

Pynnotator New Release! This new release brings a lot more stability for this annotation pipeline! Now you can use Docker for running in any machine and also it accepts .vcf and .vcf.gz files as an input. I updated all the tools (Ex. snpeff and vep) and databases (decipher, 1000genomes, dbsnp Read more…

By raony, ago
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Welcome to Mendel,MD’s documentation! — 0.2 documentation

Contents: Mendel,MD Requirements Other Libraries Needed OMIM Data Docker Manual Installation Installing PostgreSQL Database Installation on Ubuntu 16.04 LTS (tested) Installing the Pynnotator Installing Mendel,MD Creating a superuser Importing Data Upload your VCFs using the web interface Start the annotation Deployment on RedHat/CentOS 7 Pynnotator Libraries Databases Features Requirements Installation Read more…

By raony, ago
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HOW TO STUDY

1. Introduction It has been claimed that everyone has a different “learning style”. If you believe in the existence and validity of learning styles, then you might find some of the following references of interest: Claxton & Murrell 1987, “Learning Styles” (Wikipedia), Keirsey Temperament and Character Web Site, William Perry’s Read more…

By raony, ago
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Jupyter Notebook 5.0

We are pleased to announce the release of Jupyter Notebook version 5.0. This is the first major release of the Jupyter Notebook since version 4.0 and the “Big Split” of IPython and Jupyter. This release adds some long-awaited features, such as cell tagging, customizing keyboard shortcuts, copying & Source: Jupyter Read more…

By raony, ago