[bash]for i in *.wma ; do mplayer -vo null -vc dummy -af resample=44100 -ao pcm:waveheader "$i" && lame -m j -h –vbr-new -b 160 audiodump.wav -o "`basename "$i" .wma`.mp3"; done; rm -f audiodump.wav[/bash]
Month: April 2013
Pills of Science – 1 Week
source: PHD Comics
So you want to do a PhD?
Academic writing: why no ‘me’ in PhD?
Obscure C++ Features
bioinformatics cores: how to maintain confidentiality of data
GCAT Benchmarking Tool
The next five years of computational genomics at NHGRI
Using the SVD to find the needle in the haystack
A Setback for Open Science?
The future of healthcare debated and demonstrated, #TEDMED
Everpad
[bash]
sudo add-apt-repository ppa:nvbn-rm/ppa
sudo apt-get update
sudo apt-get install everpad
[/bash]
Papers of the week
Whole Genome Sequencing: A Considered Approach to Clinical Implementation.
Clinical Analysis and Interpretation of Cancer Genome Data.
Are Results of Targeted Gene Sequencing Ready to Be Used for Clinical Decision Making for Patients with Acute Myelogenous Leukemia?
Targeted exome sequencing of suspected mitochondrial disorders.
New approaches to molecular diagnosis.
Targeted Next-Generation Sequencing can Replace Sanger Sequencing in Clinical Diagnostics.
Practices and Policies of Clinical Exome Sequencing Providers: Analysis and Implications.
FishingCNV: a graphical software package for detecting rare copy number variations in exome sequencing data.
Low concordance of multiple variant-calling pipelines: practical implications for exome and genome sequencing.
Ingenuity Nabs Genome Scientist, Nathan Pearson
Democratizing Single Cell Genomics with Gajus Worthington, Fluidigm
Phylogenetics in R
Phylogenetics in R from schamber
[splus]
install.packages("ctv")
library("ctv")
install.views("Phylogenetics")
[/splus]
Mudando atalhos no Sublime Text 2
Edição do arquivo Default(linux).sublime-keymap
{ “keys”: [“ctrl+d”], “command”: “toggle_comment”, “args”: { “block”: false } },
{ “keys”: [“ctrl+shift+d”], “command”: “toggle_comment”, “args”: { “block”: true } },
Source:http://stackoverflow.com/questions/11598840/keyboard-shortcut-to-comment-lines-in-sublime-text-2
BioJS
http://biosual.blogspot.co.uk/2012/05/chromosome-component.html
https://code.google.com/p/biojs/
Links da semana
http://www.nature.com/nbt/journal/v30/n1/full/nbt.2079.html
http://jermdemo.blogspot.com/
Origins of the word Bioinformatics
http://en.wikipedia.org/wiki/Paulien_Hogeweg
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3068925/
Remove launchers from gnome panel
/home/user/.config/gnome-panel